Sro1687_g291190.1 (Contig3941.g30218)


Aliases : Contig3941.g30218

Description : Retrotransposon protein


Gene families : OG_01_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1687_g291190.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Sro1172_g248930.1 Contig1295.g12030 Hypothetical protein 0.04 OrthoFinder
Sro1340_g264410.1 Contig1391.g12823 Hypothetical protein 0.05 OrthoFinder
Sro1587_g284230.1 Contig878.g9433 Hypothetical protein 0.05 OrthoFinder
Sro160_g072320.1 Contig2985.g23728 Hypothetical protein 0.03 OrthoFinder
Sro168_g074640.1 Contig1642.g14795 Hypothetical protein 0.05 OrthoFinder
Sro168_g074650.1 Contig1642.g14796 Hypothetical protein 0.05 OrthoFinder
Sro1696_g291850.1 Contig219.g2593 Hypothetical protein 0.01 OrthoFinder
Sro1718_g293300.1 Contig3856.g29678 Hypothetical protein 0.03 OrthoFinder
Sro1944_g306940.1 Contig4559.g34042 Hypothetical protein 0.03 OrthoFinder
Sro1966_g308300.1 Contig1903.g16494 Hypothetical protein 0.11 OrthoFinder
Sro2183_g318040.1 Contig2199.g18315 Hypothetical protein 0.02 OrthoFinder
Sro2251_g320840.1 Contig398.g5372 Retrotransposon protein 0.03 OrthoFinder
Sro2371_g325220.1 Contig2343.g19263 Hypothetical protein 0.02 OrthoFinder
Sro2710_g335230.1 Contig3750.g28727 Hypothetical protein 0.08 OrthoFinder
Sro2776_g336840.1 Contig650.g7770 Hypothetical protein 0.08 OrthoFinder
Sro2778_g336910.1 Contig3659.g28248 Hypothetical protein 0.03 OrthoFinder
Sro2815_g337740.1 Contig4348.g32793 Retrotransposon protein 0.1 OrthoFinder
Sro2892_g339610.1 Contig1119.g10716 Hypothetical protein 0.06 OrthoFinder
Sro2951_g340920.1 Contig1934.g16653 Retrotransposon protein 0.08 OrthoFinder
Sro3038_g342610.1 Contig4328.g32647 Retrotransposon protein 0.01 OrthoFinder
Sro3174_g344760.1 Contig2888.g23045 Retrotransposon protein 0.02 OrthoFinder
Sro3370_g347320.1 Contig805.g8992 Hypothetical protein 0.01 OrthoFinder
Sro3373_g347370.1 Contig4689.g34856 Hypothetical protein 0.05 OrthoFinder
Sro3381_g347460.1 Contig1231.g11558 Hypothetical protein 0.03 OrthoFinder
Sro4143_g353160.1 Contig1243.g11621 Hypothetical protein 0.03 OrthoFinder
Sro4143_g353170.1 Contig1243.g11622 Hypothetical protein 0.04 OrthoFinder
Sro422_g139700.1 Contig292.g3818 Retrotransposon protein 0.03 OrthoFinder
Sro464_g148350.1 Contig363.g4883 Hypothetical protein 0.05 OrthoFinder
Sro476_g150560.1 Contig4641.g34588 Hypothetical protein 0.03 OrthoFinder
Sro715_g191780.1 Contig4130.g31590 Hypothetical protein 0.03 OrthoFinder
Sro749_g196740.1 Contig2460.g20131 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!