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  5. Sro1681_g290830.1

Sro1681_g290830.1 (Contig3788.g29082)


Aliases : Contig3788.g29082

Description : Hydroxyacid dehydrogenase homolog


Gene families : OG_01_0001381 (OrthoFinder) Phylogenetic Tree(s): OG0001381_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1681_g290830.1
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_57376 57376 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
MF GO:0051287 NAD binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
BP GO:0015743 malate transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR006139 D-isomer_2_OHA_DH_cat_dom 237 533
IPR006140 D-isomer_DH_NAD-bd 321 509
No external refs found!