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  5. Sro1674_g290330.1

Sro1674_g290330.1 (Contig3489.g27080)


Aliases : Contig3489.g27080

Description : D-alanine--D-alanyl carrier protein ligase


Gene families : OG_01_0000117 (OrthoFinder) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1674_g290330.1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Sro1326_g263050.1 Contig231.g2780 Putative fatty-acid--CoA ligase FadD21 0.04 OrthoFinder
Sro193_g082620.1 Contig826.g9161 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 13 417
No external refs found!