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  5. Sro1673_g290310.1

Sro1673_g290310.1 (Contig3669.g28360)


Aliases : Contig3669.g28360

Description : TIC 62, chloroplastic


Gene families : OG_01_0000613 (OrthoFinder) Phylogenetic Tree(s): OG0000613_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1673_g290310.1
Cluster HCCA: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000478.28 tig00000478_g1276.t1 Uncharacterized protein At2g34460, chloroplastic... 0.01 OrthoFinder
PTI_04G03610.1 No alias NAD(P)-binding domain [Interproscan]. 0.03 OrthoFinder
TP22G02810.1 No alias NAD(P)-binding domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_56927 56927 NAD(P)-binding domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 86 304
No external refs found!