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  5. Sro1653_g288810.1

Sro1653_g288810.1 (Contig3957.g30317)


Aliases : Contig3957.g30317

Description : Reverse transcriptase (RNA-dependent DNA polymerase)


Gene families : OG_01_0007333 (OrthoFinder) Phylogenetic Tree(s): OG0007333_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1653_g288810.1
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Sro147_g067850.1 Contig246.g3008 Hypothetical protein 0.03 OrthoFinder
Sro1643_g288110.1 Contig2047.g17580 Hypothetical protein 0.05 OrthoFinder
Sro2545_g330820.1 Contig2769.g22290 Reverse transcriptase (RNA-dependent DNA polymerase) 0.04 OrthoFinder
Sro706_g190450.1 Contig127.g1441 Hypothetical protein 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment

No InterPro domains available for this sequence

No external refs found!