1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro1643_g288110.1

Sro1643_g288110.1 (Contig2047.g17580)


Aliases : Contig2047.g17580

Description : Hypothetical protein


Gene families : OG_01_0007333 (OrthoFinder) Phylogenetic Tree(s): OG0007333_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1643_g288110.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Sro1653_g288810.1 Contig3957.g30317 Reverse transcriptase (RNA-dependent DNA polymerase) 0.05 OrthoFinder
Sro2545_g330820.1 Contig2769.g22290 Reverse transcriptase (RNA-dependent DNA polymerase) 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!