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  5. Sro1626_g286890.1

Sro1626_g286890.1 (Contig1454.g13330)


Aliases : Contig1454.g13330

Description : Leucine Rich Repeat


Gene families : OG_01_0000335 (OrthoFinder) Phylogenetic Tree(s): OG0000335_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1626_g286890.1
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
Sro1134_g244930.1 Contig4360.g32851 STYKc 0.02 OrthoFinder
Sro118_g057810.1 Contig2714.g21851 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro1475_g275830.1 Contig4476.g33631 LRR receptor-like serine threonine-protein kinase At4g08850-like 0.06 OrthoFinder
Sro1475_g275840.1 Contig4476.g33632 Leucine rich repeat 0.04 OrthoFinder
Sro1555_g282120.1 Contig2965.g23558 Leucine Rich Repeat 0.03 OrthoFinder
Sro1716_g293210.1 Contig2566.g20846 Leucine Rich Repeat 0.04 OrthoFinder
Sro1765_g296200.1 Contig1144.g10955 Leucine Rich Repeat 0.05 OrthoFinder
Sro1798_g298240.1 Contig1745.g15538 Leucine Rich Repeat 0.03 OrthoFinder
Sro2100_g314470.1 Contig2796.g22494 Leucine rich repeat 0.04 OrthoFinder
Sro213_g088550.1 Contig1149.g10995 Leucine Rich Repeat 0.03 OrthoFinder
Sro266_g103160.1 Contig1823.g16047 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment

No InterPro domains available for this sequence

No external refs found!