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  5. Sro160_g072280.1

Sro160_g072280.1 (Contig2985.g23724)


Aliases : Contig2985.g23724

Description : Pentatricopeptide repeat-containing protein


Gene families : OG_01_0012487 (OrthoFinder) Phylogenetic Tree(s): OG0012487_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro160_g072280.1
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
PTI_31G00380.1 No alias Pentatricopeptide repeat [Interproscan]. 0.03 OrthoFinder
TP04G01090.1 No alias Pentatricopeptide repeat [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 347 403
No external refs found!