1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro160_g072160.1

Sro160_g072160.1 (Contig2985.g23712)


Aliases : Contig2985.g23712

Description : STYKc


Gene families : OG_01_0000159 (OrthoFinder) Phylogenetic Tree(s): OG0000159_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro160_g072160.1
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
Sro186_g080700.1 Contig266.g3351 Leucine Rich Repeat 0.03 OrthoFinder
Sro2192_g318400.1 Contig3677.g28395 Leucine Rich Repeat 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008192 RNA guanylyltransferase activity IEP Enrichment
MF GO:0008193 tRNA guanylyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0070568 guanylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 204 215
No external refs found!