Sro1609_g285750.1 (Contig342.g4646)

Aliases : Contig342.g4646

Description : ECF subfamily RNA polymerase sigma-24 subunit

Gene families : OG_01_0000934 (OrthoFinder) Phylogenetic Tree(s): OG0000934_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Sro1609_g285750.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Sro115_g056710.1 Contig88.g937 Hypothetical protein 0.15 OrthoFinder
Sro115_g056720.1 Contig88.g938 Hypothetical protein 0.17 OrthoFinder
Sro115_g056730.1 Contig88.g939 Hypothetical protein 0.15 OrthoFinder
Sro115_g056740.1 Contig88.g940 Inherit from NOG: Hemolysin-type calcium-binding 0.2 OrthoFinder
Sro1609_g285730.1 Contig342.g4644 Rhs element vgr protein 0.08 OrthoFinder
Sro1785_g297400.1 Contig4132.g31598 Hypothetical protein 0.04 OrthoFinder
Sro2362_g324850.1 Contig1769.g15639 Hypothetical protein 0.03 OrthoFinder
Sro520_g159160.2 No alias Hypothetical protein 0.06 OrthoFinder
Sro520_g159200.1 Contig2679.g21676 Hypothetical protein 0.03 OrthoFinder
Sro561_g166770.1 Contig575.g7304 Hypothetical protein 0.02 OrthoFinder
Sro61_g034910.1 Contig3112.g24744 Laminin G sub domain 2 0.08 OrthoFinder
Sro941_g222600.1 Contig3325.g26143 CLECT 0.1 OrthoFinder
Sro941_g222620.1 Contig3325.g26145 To trefoil factor 0.08 OrthoFinder
Sro941_g222630.1 Contig3325.g26146 Amino sugar catabolic process 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006970 PT 129 163
No external refs found!