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  5. Sro1609_g285750.1

Sro1609_g285750.1 (Contig342.g4646)


Aliases : Contig342.g4646

Description : ECF subfamily RNA polymerase sigma-24 subunit


Gene families : OG_01_0000934 (OrthoFinder) Phylogenetic Tree(s): OG0000934_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1609_g285750.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Sro115_g056710.1 Contig88.g937 Hypothetical protein 0.15 OrthoFinder
Sro115_g056720.1 Contig88.g938 Hypothetical protein 0.17 OrthoFinder
Sro115_g056730.1 Contig88.g939 Hypothetical protein 0.15 OrthoFinder
Sro115_g056740.1 Contig88.g940 Inherit from NOG: Hemolysin-type calcium-binding 0.2 OrthoFinder
Sro1609_g285730.1 Contig342.g4644 Rhs element vgr protein 0.08 OrthoFinder
Sro1785_g297400.1 Contig4132.g31598 Hypothetical protein 0.04 OrthoFinder
Sro2362_g324850.1 Contig1769.g15639 Hypothetical protein 0.03 OrthoFinder
Sro520_g159160.2 No alias Hypothetical protein 0.06 OrthoFinder
Sro520_g159200.1 Contig2679.g21676 Hypothetical protein 0.03 OrthoFinder
Sro561_g166770.1 Contig575.g7304 Hypothetical protein 0.02 OrthoFinder
Sro61_g034910.1 Contig3112.g24744 Laminin G sub domain 2 0.08 OrthoFinder
Sro941_g222600.1 Contig3325.g26143 CLECT 0.1 OrthoFinder
Sro941_g222620.1 Contig3325.g26145 To trefoil factor 0.08 OrthoFinder
Sro941_g222630.1 Contig3325.g26146 Amino sugar catabolic process 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006970 PT 129 163
No external refs found!