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  5. Sro1587_g284220.1

Sro1587_g284220.1 (Contig878.g9432)


Aliases : Contig878.g9432

Description : Retrotransposon protein


Gene families : OG_01_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1587_g284220.1

Target Alias Description ECC score Gene Family Method Actions
Sro1172_g248930.1 Contig1295.g12030 Hypothetical protein 0.08 OrthoFinder
Sro1340_g264410.1 Contig1391.g12823 Hypothetical protein 0.07 OrthoFinder
Sro1587_g284230.1 Contig878.g9433 Hypothetical protein 0.03 OrthoFinder
Sro1587_g284240.1 Contig878.g9434 Hypothetical protein 0.06 OrthoFinder
Sro160_g072320.1 Contig2985.g23728 Hypothetical protein 0.05 OrthoFinder
Sro1718_g293300.1 Contig3856.g29678 Hypothetical protein 0.04 OrthoFinder
Sro1944_g306940.1 Contig4559.g34042 Hypothetical protein 0.04 OrthoFinder
Sro2183_g318040.1 Contig2199.g18315 Hypothetical protein 0.03 OrthoFinder
Sro2313_g322880.1 Contig2128.g17959 Retrotransposon protein 0.08 OrthoFinder
Sro2371_g325220.1 Contig2343.g19263 Hypothetical protein 0.03 OrthoFinder
Sro2671_g334310.1 Contig3506.g27169 Retrotransposon protein 0.03 OrthoFinder
Sro2892_g339610.1 Contig1119.g10716 Hypothetical protein 0.08 OrthoFinder
Sro3174_g344760.1 Contig2888.g23045 Retrotransposon protein 0.03 OrthoFinder
Sro3370_g347320.1 Contig805.g8992 Hypothetical protein 0.03 OrthoFinder
Sro3380_g347450.1 Contig1919.g16554 Hypothetical protein 0.04 OrthoFinder
Sro3381_g347460.1 Contig1231.g11558 Hypothetical protein 0.06 OrthoFinder
Sro3782_g351030.1 Contig2741.g22028 Retrotransposon protein 0.03 OrthoFinder
Sro4143_g353160.1 Contig1243.g11621 Hypothetical protein 0.08 OrthoFinder
Sro4143_g353170.1 Contig1243.g11622 Hypothetical protein 0.05 OrthoFinder
Sro422_g139700.1 Contig292.g3818 Retrotransposon protein 0.05 OrthoFinder
Sro476_g150560.1 Contig4641.g34588 Hypothetical protein 0.06 OrthoFinder
Sro494_g154220.1 Contig3119.g24787 Hypothetical protein 0.09 OrthoFinder
Sro494_g154230.1 Contig3119.g24788 Retrotransposon protein 0.04 OrthoFinder
Sro66_g037090.1 Contig399.g5379 Retrotransposon protein 0.08 OrthoFinder
Sro66_g037110.1 Contig399.g5381 Hypothetical protein 0.03 OrthoFinder
Sro715_g191780.1 Contig4130.g31590 Hypothetical protein 0.04 OrthoFinder
Sro730_g193960.1 Contig80.g828 Hypothetical protein 0.09 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0051082 unfolded protein binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!