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  5. Sro1553_g281980.1

Sro1553_g281980.1 (Contig1252.g11693)


Aliases : Contig1252.g11693

Description : Probable RNA-binding protein EIF1AD


Gene families : OG_01_0002987 (OrthoFinder) Phylogenetic Tree(s): OG0002987_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1553_g281980.1
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
OT_06G03000.1 No alias Hypothetical protein 0.02 OrthoFinder
Transcript_contig_57900 57900 RNA-binding domain, S1, IF1 type [Interproscan]. 0.01 OrthoFinder
Vocar.0019s0063.1 32892864 RNA-binding domain, S1, IF1 type [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000018.1_cds_PRW33037.1_3694 PRW33037 RNA-binding EIF1AD 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
InterPro domains Description Start Stop
IPR006196 RNA-binding_domain_S1_IF1 28 100
No external refs found!