1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro1544_g281230.1

Sro1544_g281230.1 (Contig2133.g17981)


Aliases : Contig2133.g17981

Description : Ankyrin Repeat


Gene families : OG_01_0004323 (OrthoFinder) Phylogenetic Tree(s): OG0004323_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1544_g281230.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
PTI_20G02010.1 No alias Ion transport domain; Ankyrin repeat-containing domain;... 0.01 OrthoFinder
TP07G04500.1 No alias Hypothetical protein 0.01 OrthoFinder
TP17G01410.1 No alias Ankyrin repeat-containing domain; Ion transport domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 77 169
No external refs found!