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  5. Sro1535_g280560.1

Sro1535_g280560.1 (Contig3021.g24093)


Aliases : Contig3021.g24093

Description : Histone H4


Gene families : OG_01_0000049 (OrthoFinder) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1535_g280560.1
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Cre06.g264600 30778471, HFO14 Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder
Cre06.g265050 30779745, HFO13 Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder
Cre06.g265200 30779324 Chromatin organisation.histones.H4-type histone 0.09 OrthoFinder
Cre06.g265450 30780160, HFO12 Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder
Cre06.g266600 30779351 Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder
Cre06.g268000 30778752, HFO10 Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder
Cre06.g268400 30778503, HFO9 Chromatin organisation.histones.H4-type histone 0.08 OrthoFinder
Cre06.g271300 30778524, HFO8 Chromatin organisation.histones.H4-type histone 0.09 OrthoFinder
Cre06.g274150 30779076 Chromatin organisation.histones.H4-type histone 0.09 OrthoFinder
Cre06.g274300 30779970, HFO29 Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder
Cre06.g274900 30779353 Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder
Cre06.g275700 30779739, HFO4 Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder
Cre06.g276650 30778456 Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder
Cre06.g276800 30779091, HFO24 Chromatin organisation.histones.H4-type histone 0.09 OrthoFinder
Cre12.g504600 30793030, HFO15 Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder
Cre12.g504850 30792412, HFO16 Chromatin organisation.histones.H4-type histone 0.12 OrthoFinder
Cre12.g505450 30792334, HFO17 Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder
Cre12.g506350 30793405, HFO18 Chromatin organisation.histones.H4-type histone 0.09 OrthoFinder
Cre12.g506450 30793367, HFO35 Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder
Cre17.g708650 30782678, HFO20 Chromatin organisation.histones.H4-type histone 0.09 OrthoFinder
Cre17.g709100 30782193 Chromatin organisation.histones.H4-type histone 0.09 OrthoFinder
Cz05g04160.t1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.06 OrthoFinder
Cz07g08160.t1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.07 OrthoFinder
Cz08g27150.t1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.05 OrthoFinder
Cz13g04220.t1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.07 OrthoFinder
Cz18g11090.t1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.06 OrthoFinder
Dusal.0002s00031.1 33187978 CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
Dusal.0093s00002.1 33185341 CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
Dusal.0093s00025.1 33185347 CENP-T/Histone H4, histone fold [Interproscan]. 0.05 OrthoFinder
Dusal.0152s00017.1 33186206 CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
Dusal.0260s00015.1 33185469 CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
Dusal.0322s00003.1 33197810 CENP-T/Histone H4, histone fold [Interproscan]. 0.01 OrthoFinder
Dusal.0424s00016.1 33197346 CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
Dusal.0658s00001.1 33202426 Hypothetical protein 0.04 OrthoFinder
EOD13039 No alias Hypothetical protein [Ensembl]. 0.04 OrthoFinder
EOD23019 No alias Putative histone H4 [Ensembl]. 0.04 OrthoFinder
OT_01G06370.1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.04 OrthoFinder
OT_01G06380.1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.04 OrthoFinder
OT_11G02240.1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.06 OrthoFinder
PTI_06G03840.1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.04 OrthoFinder
PTI_06G03920.1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder
Sro1642_g288070.1 Contig4503.g33765 Histone H4 0.04 OrthoFinder
Sro2314_g322920.1 Contig3467.g26906 Histone H4 0.11 OrthoFinder
TP14G03400.1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder
Vocar.0001s0879.1 32884787 CENP-T/Histone H4, histone fold [Interproscan]. 0.01 OrthoFinder
Vocar.0002s0360.1 32890737 CENP-T/Histone H4, histone fold [Interproscan]. 0.07 OrthoFinder
Vocar.0002s0365.1 32891062 CENP-T/Histone H4, histone fold [Interproscan]. 0.04 OrthoFinder
Vocar.0006s0182.1 32894065 CENP-T/Histone H4, histone fold [Interproscan]. 0.06 OrthoFinder
Vocar.0027s0141.1 32887217 CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder
Vocar.0042s0090.1 32892155 CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
Vocar.0042s0092.1 32892148 CENP-T/Histone H4, histone fold [Interproscan]. 0.01 OrthoFinder
XM_002502186.1 MICPUN_81444, 81444 CENP-T/Histone H4, histone fold [Interproscan]. 0.04 OrthoFinder
XM_003059474.1 MicpuC2_17893, 17893 CENP-T/Histone H4, histone fold [Interproscan]. 0.07 OrthoFinder
XM_003061468.1 MicpuC2_20662, 20662 Histone H4 0.05 OrthoFinder
XM_003061710.1 MicpuC2_51276, 51276 CENP-T/Histone H4, histone fold [Interproscan]. 0.05 OrthoFinder
XM_003062992.1 MicpuC2_52643, 52643 CENP-T/Histone H4, histone fold [Interproscan]. 0.07 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57296.1_9166 PRW57296 Histone H4 0.03 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57363.1_9004 PRW57363 Histone H4 0.03 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57495.1_9098 PRW57495 Histone H4 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495289.1_1287 KAA8495289 Histone H4 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 35 97
No external refs found!