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  5. Sro1524_g279590.1

Sro1524_g279590.1 (Contig122.g1372)


Aliases : Contig122.g1372

Description : Hypothetical protein


Gene families : OG_01_0000889 (OrthoFinder) Phylogenetic Tree(s): OG0000889_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1524_g279590.1
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Sro179_g078600.1 Contig4117.g31452 Hypothetical protein 0.05 OrthoFinder
Sro2312_g322870.1 Contig481.g6506 Hypothetical protein 0.06 OrthoFinder
Sro2647_g333630.1 Contig3175.g25109 Hypothetical protein 0.07 OrthoFinder
Sro2814_g337710.1 Contig2221.g18459 Hypothetical protein 0.05 OrthoFinder
Sro2814_g337720.1 Contig2221.g18460 Hypothetical protein 0.07 OrthoFinder
Sro3036_g342570.1 Contig4285.g32370 Hypothetical protein 0.05 OrthoFinder
Sro3275_g346130.1 Contig4108.g31359 Hypothetical protein 0.04 OrthoFinder
Sro3585_g349380.1 Contig858.g9393 Hypothetical protein 0.04 OrthoFinder
Sro3660_g350040.1 Contig3779.g29019 Hypothetical protein 0.03 OrthoFinder
Sro396_g134250.1 Contig2592.g21036 Hypothetical protein 0.04 OrthoFinder
Sro396_g134260.1 Contig2592.g21037 Hypothetical protein 0.13 OrthoFinder
Sro417_g138640.1 Contig2416.g19772 Hypothetical protein 0.04 OrthoFinder
Sro474_g150160.1 Contig2775.g22312 Hypothetical protein 0.03 OrthoFinder
Sro531_g161370.1 Contig357.g4813 Hypothetical protein 0.09 OrthoFinder
Sro773_g200380.1 Contig1379.g12681 Hypothetical protein 0.03 OrthoFinder
Sro924_g220800.1 Contig112.g1262 Hypothetical protein 0.11 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!