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  5. Sro151_g069210.1

Sro151_g069210.1 (Contig294.g3847)


Aliases : Contig294.g3847

Description : Syntaxin-6


Gene families : OG_01_0001667 (OrthoFinder) Phylogenetic Tree(s): OG0001667_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro151_g069210.1
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
Cre06.g290100 30779799 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder
Dusal.0936s00003.1 33189609 Target SNARE coiled-coil homology domain; Syntaxin 6,... 0.01 OrthoFinder
OT_09G04150.1 No alias Syntaxin 6, N-terminal [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56136 56136 Syntaxin 6, N-terminal [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495967.1_1965 KAA8495967 Syntaxin-61 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0048193 Golgi vesicle transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR015260 Syntaxin-6_N 61 156
IPR000727 T_SNARE_dom 251 302
No external refs found!