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Aliases : Contig294.g3846
Description : Fucoxanthin-chlorophyll a-c binding protein
Gene families : OG_01_0005064 (OrthoFinder) Phylogenetic Tree(s): OG0005064_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro151_g069200.1 | |
| Cluster | HCCA: Cluster_108 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| EOD05181 | No alias | Light harvesting protein [Ensembl]. | 0.13 | OrthoFinder | |
| EOD07089 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.17 | OrthoFinder | |
| PTI_01G08600.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.21 | OrthoFinder | |
| PTI_01G08610.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.17 | OrthoFinder | |
| PTI_22G01880.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.19 | OrthoFinder | |
| SymbC1.scaffold258.5 | 258.5 | Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
| TP02G03030.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.23 | OrthoFinder | |
| TP02G03040.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.3 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Enrichment |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | Enrichment |
| CC | GO:0009507 | chloroplast | IEP | Enrichment |
| CC | GO:0009521 | photosystem | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| CC | GO:0009536 | plastid | IEP | Enrichment |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
| MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0010024 | phytochromobilin biosynthetic process | IEP | Enrichment |
| BP | GO:0010109 | regulation of photosynthesis | IEP | Enrichment |
| BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
| MF | GO:0010242 | oxygen evolving activity | IEP | Enrichment |
| BP | GO:0015979 | photosynthesis | IEP | Enrichment |
| MF | GO:0016636 | oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | IEP | Enrichment |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | Enrichment |
| BP | GO:0019684 | photosynthesis, light reaction | IEP | Enrichment |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Enrichment |
| BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | Enrichment |
| BP | GO:0042549 | photosystem II stabilization | IEP | Enrichment |
| BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | Enrichment |
| MF | GO:0046422 | violaxanthin de-epoxidase activity | IEP | Enrichment |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0050897 | cobalt ion binding | IEP | Enrichment |
| BP | GO:0051202 | phytochromobilin metabolic process | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| MF | GO:0098809 | nitrite reductase activity | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 61 | 212 |
| No external refs found! |