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  5. Sro1512_g278790.1

Sro1512_g278790.1 (Contig3167.g25073)


Aliases : Contig3167.g25073

Description : Diatom-specific cyclin


Gene families : OG_01_0000152 (OrthoFinder) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1512_g278790.1
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Sro374_g129180.1 Contig347.g4679 Diatom-specific cyclin 0.04 OrthoFinder
Sro458_g147090.1 Contig3230.g25541 Diatom-specific cyclin 0.02 OrthoFinder
TP02G02500.1 No alias Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
CC GO:0005779 integral component of peroxisomal membrane IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0016559 peroxisome fission IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0048285 organelle fission IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
InterPro domains Description Start Stop
IPR006671 Cyclin_N 11 145
IPR004367 Cyclin_C-dom 147 253
No external refs found!