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  5. Sro1511_g278700.1

Sro1511_g278700.1 (Contig2369.g19497)


Aliases : Contig2369.g19497

Description : E3 ubiquitin-protein ligase


Gene families : OG_01_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro1511_g278700.1
Cluster HCCA: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
Sro1039_g234350.1 Contig313.g4164 Putative E3 ubiquitin-protein ligase LIN 0.03 OrthoFinder
Sro1371_g267060.1 Contig1338.g12336 Putative E3 ubiquitin-protein ligase LIN 0.03 OrthoFinder
Sro1514_g278930.1 Contig2561.g20813 Putative E3 ubiquitin-protein ligase LIN 0.03 OrthoFinder
Sro15_g010940.1 Contig791.g8820 Putative E3 ubiquitin-protein ligase LIN 0.03 OrthoFinder
Sro406_g136480.1 Contig2793.g22489 Zinc-finger of the MIZ type in Nse subunit 0.03 OrthoFinder
Sro4_g002930.1 Contig3815.g29211 Putative E3 ubiquitin-protein ligase LIN 0.03 OrthoFinder
Sro877_g214590.1 Contig139.g1540 Putative E3 ubiquitin-protein ligase LIN 0.02 OrthoFinder
Sro920_g220220.1 Contig2508.g20522 Putative E3 ubiquitin-protein ligase LIN 0.02 OrthoFinder
Sro920_g220230.1 Contig2508.g20523 U-box domain-containing protein 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR004181 Znf_MIZ 3 52
No external refs found!