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Aliases : Contig3888.g29862
Description : Chloroplastic
Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro1506_g278310.1 | |
| Cluster | HCCA: Cluster_35 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre08.g365900 | 30773702, LHCSR1 | Photosynthesis.photophosphorylation.photosystem... | 0.05 | OrthoFinder | |
| Cz16g02040.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| EOD03771 | No alias | Light-harvesting family [Ensembl]. | 0.02 | OrthoFinder | |
| EOD03774 | No alias | Light-harvesting family [Ensembl]. | 0.03 | OrthoFinder | |
| EOD06468 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD08607 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD09836 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD15375 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
| EOD19744 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD20807 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| EOD20809 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
| EOD25053 | No alias | Light-harvesting family [Ensembl]. | 0.03 | OrthoFinder | |
| EOD35878 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD38541 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| PTI_01G10030.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.07 | OrthoFinder | |
| PTI_02G04020.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_04G04620.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_05G00320.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.06 | OrthoFinder | |
| PTI_14G03460.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.06 | OrthoFinder | |
| PTI_15G00600.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_15G00620.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| TP08G04750.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| TP19G02190.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| TP23G01260.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| TP23G01270.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| TP23G01280.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.06 | OrthoFinder | |
| XM_002506509.1 | MICPUN_105009, 105009 | Chlorophyll a/b-binding protein (LI818R) | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
| MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | Enrichment |
| CC | GO:0009521 | photosystem | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
| BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
| BP | GO:0015979 | photosynthesis | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Enrichment |
| BP | GO:0017038 | protein import | IEP | Enrichment |
| BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 39 | 199 |
| No external refs found! |