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  5. Sro149_g068340.1

Sro149_g068340.1 (Contig259.g3202)


Aliases : Contig259.g3202

Description : B binding protein L1818, chloroplastic


Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro149_g068340.1
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
EOD03771 No alias Light-harvesting family [Ensembl]. 0.01 OrthoFinder
EOD03774 No alias Light-harvesting family [Ensembl]. 0.01 OrthoFinder
EOD05780 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD06468 No alias Light harvesting protein [Ensembl]. 0.03 OrthoFinder
EOD08607 No alias Light harvesting protein [Ensembl]. 0.01 OrthoFinder
EOD09836 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD15375 No alias Light harvesting protein [Ensembl]. 0.01 OrthoFinder
EOD20807 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
EOD20809 No alias Light harvesting protein [Ensembl]. 0.01 OrthoFinder
PTI_01G10030.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
PTI_01G11600.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_02G03310.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_05G00320.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
PTI_07G04400.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
PTI_14G03460.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
TP01G11130.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
TP05G05630.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
TP08G04750.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
TP09G03710.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
TP18G01450.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
TP19G02190.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
TP23G01260.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
TP23G01280.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498066.1_7019 KAA8498066 Chlorophyll a-b binding protein of LHCII type III, chloroplastic 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498850.1_7803 KAA8498850 Chlorophyll a-b binding protein, chloroplastic 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499797.1_8750 KAA8499797 Chlorophyll a-b binding protein 1B-21, chloroplastic 0.01 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8493980.1_3844 KAA8493980 Chlorophyll a-b binding protein 1B-21, chloroplastic 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 20 183
No external refs found!