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  5. Sro149_g068330.1

Sro149_g068330.1 (Contig259.g3201)


Aliases : Contig259.g3201

Description : Chloroplastic


Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro149_g068330.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
EOD03771 No alias Light-harvesting family [Ensembl]. 0.01 OrthoFinder
EOD03774 No alias Light-harvesting family [Ensembl]. 0.01 OrthoFinder
EOD05780 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD06468 No alias Light harvesting protein [Ensembl]. 0.03 OrthoFinder
EOD09836 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD15375 No alias Light harvesting protein [Ensembl]. 0.03 OrthoFinder
EOD16739 No alias Light harvesting protein [Ensembl]. 0.01 OrthoFinder
EOD19744 No alias Light harvesting protein [Ensembl]. 0.01 OrthoFinder
EOD20807 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
EOD20809 No alias Light harvesting protein [Ensembl]. 0.01 OrthoFinder
EOD25053 No alias Light-harvesting family [Ensembl]. 0.03 OrthoFinder
EOD40541 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
PTI_01G10030.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
PTI_02G03310.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
PTI_05G00320.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
PTI_07G04400.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
PTI_14G03460.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Sro1207_g252450.1 Contig242.g2948 B binding protein L1818, chloroplastic 0.03 OrthoFinder
Sro412_g137900.1 Contig2922.g23262 Chloroplastic 0.03 OrthoFinder
SymbC1.scaffold10620.1 10620.1 Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
TP01G11130.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
TP08G04750.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
TP09G03710.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
TP18G01450.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
TP19G02190.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
TP23G01260.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
TP23G01280.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498066.1_7019 KAA8498066 Chlorophyll a-b binding protein of LHCII type III, chloroplastic 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498850.1_7803 KAA8498850 Chlorophyll a-b binding protein, chloroplastic 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499797.1_8750 KAA8499797 Chlorophyll a-b binding protein 1B-21, chloroplastic 0.02 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8493980.1_3844 KAA8493980 Chlorophyll a-b binding protein 1B-21, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 22 185
No external refs found!