Sro146_g067460.1 (Contig2363.g19436)

Aliases : Contig2363.g19436

Description : Shock factor protein 4

Gene families : OG_01_0000044 (OrthoFinder) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro146_g067460.1
Cluster	HCCA: Cluster_89

Target	Alias	Description	ECC score	Gene Family Method
PTI_18G00910.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.03	OrthoFinder
PTI_18G02990.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.02	OrthoFinder
Sro1120_g243330.1	Contig896.g9503	Stress transcription factor A-3	0.03	OrthoFinder
Sro168_g074930.1	Contig1642.g14824	Shock factor protein 4	0.03	OrthoFinder
Sro1746_g294990.1	Contig2939.g23366	Shock factor protein 2	0.04	OrthoFinder
Sro299_g111240.1	Contig1218.g11426	Heat stress transcription factor	0.04	OrthoFinder
Sro450_g145560.1	Contig271.g3481	Heat stress transcription factor	0.03	OrthoFinder
Sro482_g151900.1	Contig232.g2800	Transcription factor	0.03	OrthoFinder
Sro53_g031420.1	Contig1592.g14482	Shock factor protein	0.03	OrthoFinder
TP07G03390.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	93	186

External Links

No external refs found!

Sro146_g067460.1 (Contig2363.g19436)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation