Sro146_g067460.1 (Contig2363.g19436)

Aliases : Contig2363.g19436

Description : Shock factor protein 4

Gene families : OG_01_0000044 (OrthoFinder) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Sro146_g067460.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
PTI_18G00910.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.03 OrthoFinder
PTI_18G02990.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.02 OrthoFinder
Sro1120_g243330.1 Contig896.g9503 Stress transcription factor A-3 0.03 OrthoFinder
Sro168_g074930.1 Contig1642.g14824 Shock factor protein 4 0.03 OrthoFinder
Sro1746_g294990.1 Contig2939.g23366 Shock factor protein 2 0.04 OrthoFinder
Sro299_g111240.1 Contig1218.g11426 Heat stress transcription factor 0.04 OrthoFinder
Sro450_g145560.1 Contig271.g3481 Heat stress transcription factor 0.03 OrthoFinder
Sro482_g151900.1 Contig232.g2800 Transcription factor 0.03 OrthoFinder
Sro53_g031420.1 Contig1592.g14482 Shock factor protein 0.03 OrthoFinder
TP07G03390.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 93 186
No external refs found!