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  5. Sro1468_g275210.1

Sro1468_g275210.1 (Contig3834.g29487)


Aliases : Contig3834.g29487

Description : Leucine Rich Repeat


Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1468_g275210.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Sro106_g053670.1 Contig1122.g10764 Leucine Rich Repeat 0.03 OrthoFinder
Sro1126_g244030.1 Contig1609.g14564 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro1331_g263510.1 Contig1733.g15457 Leucine rich repeat N-terminal domain 0.02 OrthoFinder
Sro1460_g274600.1 Contig332.g4412 Leucine Rich Repeat 0.01 OrthoFinder
Sro1543_g281110.1 Contig1530.g13907 Leucine Rich Repeat 0.03 OrthoFinder
Sro2695_g334880.1 Contig897.g9508 Leucine Rich Repeat 0.02 OrthoFinder
Sro283_g107800.1 Contig4255.g32211 Leucine Rich Repeat 0.03 OrthoFinder
Sro32_g021020.1 Contig3715.g28575 Leucine Rich Repeat 0.03 OrthoFinder
Sro337_g120550.1 Contig2800.g22513 STYKc 0.02 OrthoFinder
Sro4136_g353110.1 Contig3023.g24105 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro449_g145380.1 Contig3482.g27008 Leucine rich repeat 0.03 OrthoFinder
Sro45_g026870.1 Contig2311.g19069 Leucine Rich Repeat 0.01 OrthoFinder
Sro52_g030970.1 Contig3190.g25180 Leucine Rich Repeat 0.05 OrthoFinder
Sro558_g166260.1 Contig3624.g28024 Leucine Rich Repeat 0.05 OrthoFinder
Sro578_g169850.1 Contig83.g894 Leucine Rich Repeat 0.03 OrthoFinder
Sro73_g040430.1 Contig3929.g30144 Leucine Rich Repeat 0.03 OrthoFinder
Sro905_g218560.1 Contig2792.g22468 Leucine Rich Repeat 0.02 OrthoFinder
Sro970_g226320.1 Contig1965.g16828 Leucine Rich Repeat 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment

No InterPro domains available for this sequence

No external refs found!