1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro1438_g272630.1

Sro1438_g272630.1 (Contig3435.g26742)


Aliases : Contig3435.g26742

Description : Superoxide dismutase [Mn], mitochondrial (Fragment)


Gene families : OG_01_0000261 (OrthoFinder) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1438_g272630.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cre02.g096150 30785538, MSD1 Redox homeostasis.enzymatic reactive oxygen species... 0.01 OrthoFinder
Cz03g14130.t1 No alias Manganese/iron superoxide dismutase, N-terminal;... 0.02 OrthoFinder
Dusal.0399s00005.1 33191733 Manganese/iron superoxide dismutase, N-terminal;... 0.01 OrthoFinder
Dusal.0483s00002.1 33190634 Manganese/iron superoxide dismutase, N-terminal;... 0.01 OrthoFinder
Dusal.3262s00001.1 33203730 Manganese/iron superoxide dismutase, N-terminal [Interproscan]. 0.01 OrthoFinder
PTI_09G03520.1 No alias Manganese/iron superoxide dismutase, N-terminal;... 0.02 OrthoFinder
SymbC1.scaffold16.192 16.192 Manganese/iron superoxide dismutase, N-terminal; Protein... 0.01 OrthoFinder
TP05G03430.1 No alias Manganese/iron superoxide dismutase, C-terminal;... 0.01 OrthoFinder
Vocar.0057s0039.1 32894716 Manganese/iron superoxide dismutase, C-terminal;... 0.02 OrthoFinder
XM_003058009.1 MicpuC2_49539, 49539 Manganese superoxide dismutase (MSD) 0.01 OrthoFinder
lcl|BLLF01000536.1_cds_GFH12749.1_7226 HaLaN_08493, GFH12749 Superoxide dismutase 0.01 OrthoFinder
lcl|BLLF01003782.1_cds_GFH28207.1_22684 HaLaN_26659, GFH28207 Superoxide dismutase 0.02 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18355.1_5789 PRW18355 Superoxide dismutase [Fe] 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEA Interproscan
BP GO:0006801 superoxide metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
InterPro domains Description Start Stop
IPR019831 Mn/Fe_SOD_N 47 125
No external refs found!