1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro1437_g272520.1

Sro1437_g272520.1 (Contig1494.g13641)


Aliases : Contig1494.g13641

Description : Heat shock 70 kDa protein (Fragment)


Gene families : OG_01_0000199 (OrthoFinder) Phylogenetic Tree(s): OG0000199_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1437_g272520.1
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.33 tig00000241_g20891.t1 External stimuli response.temperature.Hsp... 0.01 OrthoFinder
Cre02.g080600 30785719 External stimuli response.temperature.Hsp... 0.03 OrthoFinder
Cre08.g372100 30774022, HSP70A External stimuli response.temperature.Hsp... 0.02 OrthoFinder
Cz06g15020.t1 No alias Heat shock protein 70 family [Interproscan]. 0.03 OrthoFinder
Cz17g14060.t1 No alias Heat shock protein 70 family [Interproscan]. 0.02 OrthoFinder
Dusal.0433s00006.1 33191382 Heat shock protein 70 family [Interproscan]. 0.02 OrthoFinder
EOD17686 No alias Heat shock protein 70 family [Interproscan]. 0.01 OrthoFinder
EOD30763 No alias Heat shock protein 70 family [Interproscan]. 0.03 OrthoFinder
EOD31771 No alias Heat shock protein 70 family [Interproscan]. 0.02 OrthoFinder
EOD32882 No alias Heat shock protein 70 family [Interproscan]. 0.03 OrthoFinder
EOD34346 No alias Heat shock protein 70 family [Interproscan]. 0.01 OrthoFinder
OT_17G02180.1 No alias Heat shock protein 70 family [Interproscan]. 0.01 OrthoFinder
PTI_01G07940.1 No alias Heat shock protein 70 family [Interproscan]. 0.04 OrthoFinder
PTI_04G03360.1 No alias Heat shock protein 70 family [Interproscan]. 0.05 OrthoFinder
PTI_13G01290.1 No alias Heat shock protein 70 family [Interproscan]. 0.06 OrthoFinder
SymbC1.scaffold9320.1 9320.1 Heat shock protein 70 family [Interproscan]. 0.01 OrthoFinder
TP03G08590.1 No alias Heat shock protein 70 family [Interproscan]. 0.05 OrthoFinder
Transcript_contig_78210 78210 Heat shock protein 70 family [Interproscan]. 0.01 OrthoFinder
Vocar.0006s0028.1 32894285 Heat shock protein 70 family [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01002191.1_cds_GFH23092.1_17569 HaLaN_20650, GFH23092 Heat shock protein 70 0.01 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492910.1_2646 KAA8492910 Heat shock cognate 70 kDa protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR013126 Hsp_70_fam 58 665
No external refs found!