1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro1433_g272200.1

Sro1433_g272200.1 (Contig1680.g15088)


Aliases : Contig1680.g15088

Description : Oxygen-dependent choline dehydrogenase


Gene families : OG_01_0001078 (OrthoFinder) Phylogenetic Tree(s): OG0001078_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1433_g272200.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
EOD32856 No alias Choline dehydrogenase [Ensembl]. 0.03 OrthoFinder
Sro55_g032230.1 Contig4458.g33497 Alcohol dehydrogenase [acceptor] 0.04 OrthoFinder
TP08G04640.1 No alias Glucose-methanol-choline oxidoreductase, C-terminal;... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000172 GMC_OxRdtase_N 41 359
IPR007867 GMC_OxRtase_C 455 589
No external refs found!