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  5. Sro141_g065990.1

Sro141_g065990.1 (Contig65.g623)


Aliases : Contig65.g623

Description : Amp-dependent synthetase and ligase


Gene families : OG_01_0000117 (OrthoFinder) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro141_g065990.1
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Sro11_g008500.1 Contig724.g8324 D-alanine--D-alanyl carrier protein ligase 0.04 OrthoFinder
Sro1945_g306990.1 Contig3128.g24832 Hypothetical protein 0.05 OrthoFinder
Sro1_g000950.1 Contig3007.g24010 D-alanine--D-alanyl carrier protein ligase 0.04 OrthoFinder
Sro225_g091720.1 Contig1661.g14970 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder
Sro653_g181920.1 Contig4252.g32184 D-alanine--D-alanyl carrier protein ligase 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 12 83
No external refs found!