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  5. Sro1418_g270990.1

Sro1418_g270990.1 (Contig4752.g35215)


Aliases : Contig4752.g35215

Description : Transposon Tf2


Gene families : OG_01_0000071 (OrthoFinder) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1418_g270990.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cz01g02130.t1 No alias Integrase zinc-binding domain [Interproscan]. 0.02 OrthoFinder
Cz01g02140.t1 No alias Chromo domain; Integrase, catalytic core [Interproscan]. 0.01 OrthoFinder
Cz08g20010.t1 No alias Integrase zinc-binding domain; Integrase, catalytic... 0.01 OrthoFinder
Cz09g17100.t1 No alias Integrase zinc-binding domain; Integrase, catalytic... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
InterPro domains Description Start Stop
IPR041588 Integrase_H2C2 16 71
No external refs found!