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  5. Sro140_g065500.1

Sro140_g065500.1 (Contig1537.g13966)


Aliases : Contig1537.g13966

Description : GTPase HflX


Gene families : OG_01_0000962 (OrthoFinder) Phylogenetic Tree(s): OG0000962_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro140_g065500.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021135.19 tig00021135_g18940.t1 GTP-binding protein At3g49725, chloroplastic... 0.02 OrthoFinder
Cre16.g665650 30776979 GTP-binding protein At3g49725, chloroplastic... 0.02 OrthoFinder
Cz03g18280.t1 No alias GTP-binding protein, middle domain; GTP binding domain;... 0.04 OrthoFinder
Cz04g36170.t1 No alias GTP-binding protein, middle domain; GTP binding domain;... 0.04 OrthoFinder
SymbC1.scaffold70.21 70.21 Inositol monophosphatase-like; RNA polymerase sigma... 0.02 OrthoFinder
Transcript_contig_946 946 GTPase HflX, N-terminal [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 378 498
IPR032305 GTP-bd_M 289 369
IPR025121 GTPase_HflX_N 183 287
No external refs found!