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  5. Sro1409_g270140.1

Sro1409_g270140.1 (Contig1095.g10595)


Aliases : Contig1095.g10595

Description : UPF0187 protein


Gene families : OG_01_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1409_g270140.1
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Cre07.g355300 30775338 Solute transport.channels.VCCN chloride anion channel 0.03 OrthoFinder
Dusal.0033s00032.1 33202500 Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
PTI_10G00030.1 No alias Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
Sro1713_g292960.1 Contig2943.g23376 UPF0187 protein 0.03 OrthoFinder
lcl|BLLF01000981.1_cds_GFH16336.1_10813 HaLaN_12733, GFH16336 Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33911.1_2861 PRW33911 Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33278.1_3524 PRW33278 UPF0187 chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0044550 secondary metabolite biosynthetic process IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
BP GO:0046937 phytochelatin metabolic process IEP Enrichment
BP GO:0046938 phytochelatin biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR021134 Bestrophin/UPF0187 116 375
No external refs found!