Sro1392_g268860.1 (Contig2185.g18221)

Aliases : Contig2185.g18221

Description : Probable ATP-dependent RNA helicase spindle-E

Gene families : OG_01_0008882 (OrthoFinder) Phylogenetic Tree(s): OG0008882_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro1392_g268860.1
Cluster	HCCA: Cluster_32

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	Enrichment
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Enrichment
MF	GO:0004402	histone acetyltransferase activity	IEP	Enrichment
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Enrichment
BP	GO:0006325	chromatin organization	IEP	Enrichment
BP	GO:0006473	protein acetylation	IEP	Enrichment
BP	GO:0006475	internal protein amino acid acetylation	IEP	Enrichment
BP	GO:0007155	cell adhesion	IEP	Enrichment
MF	GO:0008289	lipid binding	IEP	Enrichment
BP	GO:0016569	covalent chromatin modification	IEP	Enrichment
BP	GO:0016570	histone modification	IEP	Enrichment
BP	GO:0016573	histone acetylation	IEP	Enrichment
BP	GO:0018205	peptidyl-lysine modification	IEP	Enrichment
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	Enrichment
BP	GO:0018394	peptidyl-lysine acetylation	IEP	Enrichment
BP	GO:0022610	biological adhesion	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Enrichment
BP	GO:0043543	protein acylation	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Enrichment
MF	GO:0070001	aspartic-type peptidase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	788	911
IPR011545	DEAD/DEAH_box_helicase_dom	558	711
IPR039436	Asteroid_dom	188	310

External Links

No external refs found!