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  5. Sro1351_g265220.1

Sro1351_g265220.1 (Contig2702.g21765)


Aliases : Contig2702.g21765

Description : Do-like 8, chloroplastic


Gene families : OG_01_0000099 (OrthoFinder) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1351_g265220.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020902.80 tig00020902_g15035.t1 No description available 0.02 OrthoFinder
Cre12.g498500 30793568, DEG11 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder
Cz01g38270.t1 No alias Trypsin-like peptidase domain; PDZ domain [Interproscan]. 0.01 OrthoFinder
Cz02g25040.t1 No alias Trypsin-like peptidase domain; PDZ domain [Interproscan]. 0.02 OrthoFinder
Dusal.0010s00005.1 33196819 Trypsin-like peptidase domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold20.4 20.4 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_53695 53695 Trypsin-like peptidase domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_55915 55915 PDZ domain; Trypsin-like peptidase domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_57188 57188 Trypsin-like peptidase domain [Interproscan]. 0.01 OrthoFinder
Vocar.0001s0901.1 32884820 Trypsin-like peptidase domain; PDZ domain [Interproscan]. 0.02 OrthoFinder
Vocar.0026s0089.1 32892433 Trypsin-like peptidase domain; PDZ domain [Interproscan]. 0.01 OrthoFinder
XM_003062649.1 MicpuC2_21635, 21635 Trypsin-like peptidase domain; PDZ domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59774.1_6697 PRW59774 Protease Do-like chloroplastic isoform X1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0003993 acid phosphatase activity IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR001478 PDZ 371 460
No external refs found!