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  5. Sro1343_g264640.1

Sro1343_g264640.1 (Contig3518.g27232)


Aliases : Contig3518.g27232

Description : Splicing factor 38B


Gene families : OG_01_0002202 (OrthoFinder) Phylogenetic Tree(s): OG0002202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1343_g264640.1
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Dusal.0135s00017.1 33194040 Pre-mRNA-splicing factor 38 [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold2860.1 2860.1 Pre-mRNA-splicing factor 38 [Interproscan]. 0.01 OrthoFinder
Transcript_contig_61399 61399 Pre-mRNA-splicing factor 38 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005037 PRP38 42 210
No external refs found!