1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro1339_g264281.1

Sro1339_g264281.1


Description : Leucine-rich repeat [Interproscan].


Gene families : OG_01_0000236 (OrthoFinder) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1339_g264281.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Sro1128_g244291.1 No alias Hypothetical protein 0.03 OrthoFinder
Sro207_g086911.1 No alias Hypothetical protein 0.02 OrthoFinder
Sro3848_g351441.1 No alias Hypothetical protein 0.02 OrthoFinder
Sro401_g135310.1 Contig2817.g22589 Leucine Rich Repeat 0.03 OrthoFinder
Sro430_g141260.1 Contig4379.g32920 Hypothetical protein 0.03 OrthoFinder
Sro45_g026800.1 Contig2311.g19062 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro517_g158711.1 No alias Hypothetical protein 0.04 OrthoFinder
Sro522_g159560.1 Contig3319.g26042 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro527_g160751.1 No alias Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004334 fumarylacetoacetase activity IEP Enrichment
MF GO:0004383 guanylate cyclase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006182 cGMP biosynthetic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
MF GO:0009975 cyclase activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Enrichment
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0046068 cGMP metabolic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0052652 cyclic purine nucleotide metabolic process IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 839 896
IPR001611 Leu-rich_rpt 647 706
No external refs found!