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  5. Sro1328_g263130.1

Sro1328_g263130.1 (Contig1099.g10653)


Aliases : Contig1099.g10653

Description : Protein L27


Gene families : OG_01_0000894 (OrthoFinder) Phylogenetic Tree(s): OG0000894_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1328_g263130.1
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.47 tig00022075_g23608.t1 50S ribosomal protein L27, chloroplastic OS=Spinacia oleracea 0.01 OrthoFinder
Cre06.g300800 30778964, PRPL27 50S ribosomal protein L27, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder
Cz08g09200.t1 No alias Ribosomal protein L27 [Interproscan]. 0.02 OrthoFinder
Dusal.1029s00008.1 33196318 Ribosomal protein L27 [Interproscan]. 0.02 OrthoFinder
OT_07G01560.1 No alias Ribosomal protein L27 [Interproscan]. 0.03 OrthoFinder
Sro51_chlor_g029890.1 Rpl27 Rpl27 0.03 OrthoFinder
TP03G03420.1 No alias Ribosomal protein L27 [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0304.1 32885658 Ribosomal protein L27 [Interproscan]. 0.02 OrthoFinder
XM_002499554.1 MICPUN_56110, 56110 Ribosomal protein L27 (RPL27) 0.01 OrthoFinder
lcl|BLLF01003179.1_cds_GFH26609.1_21086 HaLaN_24785, GFH26609 50S ribosomal protein L27 0.03 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32583.1_3993 PRW32583 50S ribosomal L27 0.02 OrthoFinder
lcl|VRMN01000017.1_cds_KAA8490960.1_6163 KAA8490960 50S ribosomal protein L27 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005759 mitochondrial matrix IEP Enrichment
CC GO:0005761 mitochondrial ribosome IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0072546 EMC complex IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 34 116
No external refs found!