Sro1319_g262310.1 (Contig3198.g25292)


Aliases : Contig3198.g25292

Description : Transferase type-2 subunit beta


Gene families : OG_01_0000594 (OrthoFinder) Phylogenetic Tree(s): OG0000594_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1319_g262310.1
Cluster HCCA: Cluster_321

Target Alias Description ECC score Gene Family Method Actions
Dusal.0256s00009.1 33203449 PFTB repeat [Interproscan]. 0.01 OrthoFinder
EOD41967 No alias PFTB repeat [Interproscan]. 0.02 OrthoFinder
TP19G01950.1 No alias PFTB repeat [Interproscan]. 0.02 OrthoFinder
XM_003061594.1 MicpuC2_44694, 44694 PFTB repeat [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59450.1_6822 PRW59450 Farnesyltransferase subunit beta 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
BP GO:0008535 respiratory chain complex IV assembly IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Enrichment
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
InterPro domains Description Start Stop
IPR001330 PFTB_repeat 290 334
IPR001330 PFTB_repeat 147 188
IPR001330 PFTB_repeat 243 285
IPR001330 PFTB_repeat 195 236
IPR001330 PFTB_repeat 97 136
No external refs found!