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  5. Sro1304_g261120.1

Sro1304_g261120.1 (Contig1395.g12838)


Aliases : Contig1395.g12838

Description : Ankyrin repeat protein


Gene families : OG_01_0000052 (OrthoFinder) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1304_g261120.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Sro1103_g241700.1 Contig4430.g33247 Ankyrin repeat protein 0.02 OrthoFinder
Sro1118_g243090.1 Contig728.g8387 Ankyrin repeat protein 0.02 OrthoFinder
Sro114_g056370.1 No alias Ankyrin repeat protein 0.03 OrthoFinder
Sro1384_g268090.1 Contig2234.g18571 Ankyrin repeat protein 0.04 OrthoFinder
Sro2018_g311240.1 Contig4652.g34631 Ankyrin repeat protein 0.05 OrthoFinder
Sro2143_g316260.1 Contig60.g485 Ankyrin repeat protein 0.02 OrthoFinder
Sro2173_g317620.1 Contig2757.g22201 Ankyrin repeat protein 0.03 OrthoFinder
Sro218_g089980.1 Contig1136.g10899 Ankyrin repeat protein 0.04 OrthoFinder
Sro27_g018390.1 Contig3926.g30100 Ankyrin repeat protein 0.03 OrthoFinder
Sro2890_g339570.1 Contig1304.g12101 Ankyrin repeat protein 0.04 OrthoFinder
Sro425_g140200.1 Contig3537.g27365 Ankyrin repeat protein 0.03 OrthoFinder
Sro482_g151730.1 Contig232.g2783 Ankyrin repeat protein 0.03 OrthoFinder
Sro55_g032220.1 Contig4458.g33496 Ankyrin repeat protein 0.04 OrthoFinder
Sro55_g032510.1 Contig4458.g33525 Hypothetical protein 0.02 OrthoFinder
Sro57_g033400.1 Contig284.g3708 Hypothetical protein 0.04 OrthoFinder
Sro790_g202870.1 Contig4757.g458 Ankyrin repeat protein 0.02 OrthoFinder
Sro932_g221650.1 Contig2857.g22908 Ankyrin repeat protein 0.04 OrthoFinder
Sro952_g224061.1 No alias Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!