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  5. Sro12_g009400.1

Sro12_g009400.1 (Contig2293.g18960)


Aliases : Contig2293.g18960

Description : Trans isomerase E


Gene families : OG_01_0000048 (OrthoFinder) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro12_g009400.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Cre06.g288750 30780037, CBP20 No description available 0.01 OrthoFinder
Cz14g18060.t1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold958.4 958.4 Zinc finger, CCCH-type; RNA recognition motif domain... 0.01 OrthoFinder
Transcript_contig_57315 57315 RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
XM_002504161.1 MICPUN_76997, 76997 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 13 82
No external refs found!