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  5. Sro12_g009300.1

Sro12_g009300.1 (Contig2293.g18950)


Aliases : Contig2293.g18950

Description : CRAL-TRIO lipid binding domain [Interproscan].


Gene families : OG_01_0000045 (OrthoFinder) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro12_g009300.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Sro118_g057580.1 Contig2714.g21828 Hypothetical protein 0.05 OrthoFinder
Sro1283_g259110.1 Contig1308.g12124 Hypothetical protein 0.02 OrthoFinder
Sro1375_g267380.1 Contig4583.g34248 Hypothetical protein 0.03 OrthoFinder
Sro140_g065590.1 Contig1537.g13975 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro1449_g273700.1 Contig2836.g22760 Hypothetical protein 0.05 OrthoFinder
Sro156_g070870.1 Contig473.g6425 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro156_g070880.1 Contig473.g6426 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro190_g082030.1 Contig3488.g27078 Hypothetical protein 0.03 OrthoFinder
Sro200_g084740.1 Contig201.g2365 Hypothetical protein 0.03 OrthoFinder
Sro232_g093920.1 Contig4063.g31157 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro241_g096360.1 Contig4317.g32554 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro241_g096370.1 Contig4317.g32555 Hypothetical protein 0.03 OrthoFinder
Sro2929_g340410.1 Contig3350.g26215 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro315_g115270.1 Contig447.g6050 Hypothetical protein 0.03 OrthoFinder
Sro540_g162940.1 Contig4704.g34983 Hypothetical protein 0.02 OrthoFinder
Sro634_g178940.1 Contig3030.g24185 Hypothetical protein 0.02 OrthoFinder
Sro634_g178951.1 No alias Hypothetical protein 0.05 OrthoFinder
Sro635_g179160.1 Contig3513.g27217 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro636_g179220.1 Contig84.g899 Hypothetical protein 0.04 OrthoFinder
Sro74_g040870.1 Contig4700.g34949 Hypothetical protein 0.04 OrthoFinder
Sro76_g041770.1 Contig184.g2155 Hypothetical protein 0.02 OrthoFinder
Sro796_g203660.1 Contig2034.g17464 Hypothetical protein 0.04 OrthoFinder
Sro94_g049130.1 Contig150.g1703 Hypothetical protein 0.04 OrthoFinder
Sro98_g050570.1 Contig3362.g26349 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004057 arginyltransferase activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0016598 protein arginylation IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 71 143
No external refs found!