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  5. Sro1292_g260020.1

Sro1292_g260020.1 (Contig3668.g28343)


Aliases : Contig3668.g28343

Description : Protein ligase Arkadia


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1292_g260020.1
Cluster HCCA: Cluster_410

Target Alias Description ECC score Gene Family Method Actions
PTI_10G01950.1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
PTI_15G03630.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
PTI_21G01960.1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
TP07G01800.1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
XM_002505622.1 MICPUN_109335, 109335 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
XM_002507807.1 MICPUN_60573, 60573 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
XM_003063325.1 MicpuC2_36262, 36262 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 280 322
No external refs found!