1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro1292_g259960.1

Sro1292_g259960.1 (Contig3668.g28337)


Aliases : Contig3668.g28337

Description : Extracellular solute-binding protein


Gene families : OG_01_0000402 (OrthoFinder) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1292_g259960.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Sro1067_g237390.1 Contig2309.g19054 Putative amino-acid ABC transporter-binding protein YhdW 0.05 OrthoFinder
Sro1098_g241040.1 Contig3483.g27025 Extracellular solute-binding protein 0.03 OrthoFinder
Sro159_g071780.1 Contig500.g6718 Extracellular solute-binding protein 0.02 OrthoFinder
Sro1903_g304520.1 Contig4361.g32859 Putative amino-acid ABC transporter-binding protein YhdW 0.02 OrthoFinder
Sro1920_g305520.1 Contig2527.g20644 Extracellular solute-binding protein 0.04 OrthoFinder
Sro2307_g322760.1 Contig1768.g15637 Putative amino-acid ABC transporter-binding protein YhdW 0.04 OrthoFinder
Sro282_g107620.1 Contig1420.g13105 Extracellular solute-binding protein 0.02 OrthoFinder
Sro3494_g348610.1 Contig3168.g25076 Extracellular solute-binding protein 0.05 OrthoFinder
Sro441_g143610.1 Contig470.g6375 Hypothetical protein 0.02 OrthoFinder
Sro441_g143660.1 Contig470.g6380 Extracellular solute-binding protein 0.03 OrthoFinder
Sro4503_g354150.1 Contig4238.g32110 Hypothetical protein 0.03 OrthoFinder
Sro474_g150180.1 Contig2775.g22314 Putative amino-acid ABC transporter-binding protein YhdW 0.04 OrthoFinder
Sro73_g040260.1 Contig3929.g30127 Putative amino-acid ABC transporter-binding protein YhdW 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0018580 nitronate monooxygenase activity IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!