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  5. Sro1272_g258180.1

Sro1272_g258180.1 (Contig3783.g29035)


Aliases : Contig3783.g29035

Description : Spermatogenesis-associated protein 5-like protein 1


Gene families : OG_01_0000083 (OrthoFinder) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1272_g258180.1
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000525.10 tig00000525_g1953.t1 Cell division control protein 48 homolog C... 0.01 OrthoFinder
Cre09.g398550 30781371 Cell division control protein 48 homolog C... 0.01 OrthoFinder
PTI_14G01730.1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.03 OrthoFinder
XM_002500797.1 MICPUN_79795, 79795 AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.02 OrthoFinder
XM_003059387.1 MicpuC2_33829, 33829 AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57417.1_8902 PRW57417 Ribosome biogenesis ATPase RIX7 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 261 394
IPR003959 ATPase_AAA_core 567 699
IPR041569 AAA_lid_3 417 452
IPR041569 AAA_lid_3 725 760
No external refs found!