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  5. Sro126_g060610.1

Sro126_g060610.1 (Contig82.g878)


Aliases : Contig82.g878

Description : Protein ligase RNF181


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro126_g060610.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020934.54 tig00020934_g16122.t1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
Cre12.g544327 30791687 No description available 0.02 OrthoFinder
Dusal.0110s00028.1 33194367 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
PTI_01G05830.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
PTI_23G01280.1 No alias Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold2499.3 2499.3 Ankyrin repeats (many copies); Ankyrin repeat-containing... 0.01 OrthoFinder
SymbC1.scaffold5815.1 5815.1 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492818.1_2554 KAA8492818 RING finger protein 24 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0005200 structural constituent of cytoskeleton IEP Enrichment
BP GO:0006471 protein ADP-ribosylation IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 154 196
No external refs found!