- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Contig4283.g32366
Description : SnoaL-like domain [Interproscan].
Gene families : OG_01_0001175 (OrthoFinder) Phylogenetic Tree(s): OG0001175_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro1268_g257780.1 | |
| Cluster | HCCA: Cluster_64 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro1068_g237490.1 | Contig852.g9368 | Hypothetical protein | 0.03 | OrthoFinder | |
| Sro1123_g243610.1 | Contig3394.g26535 | Polyketide cyclase SnoaL-like [Interproscan]. | 0.04 | OrthoFinder | |
| Sro116_g057150.1 | Contig2228.g18491 | Hypothetical protein | 0.03 | OrthoFinder | |
| Sro1170_g248770.1 | Contig3531.g27306 | Hypothetical protein | 0.03 | OrthoFinder | |
| Sro1309_g261560.1 | Contig3914.g29999 | SnoaL-like domain [Interproscan]. | 0.03 | OrthoFinder | |
| Sro1309_g261570.1 | Contig3914.g30000 | Polyketide cyclase SnoaL-like [Interproscan]. | 0.03 | OrthoFinder | |
| Sro140_g065440.1 | Contig1537.g13960 | Hypothetical protein | 0.04 | OrthoFinder | |
| Sro140_g065450.1 | Contig1537.g13961 | Hypothetical protein | 0.04 | OrthoFinder | |
| Sro231_g093590.1 | Contig3051.g24272 | Polyketide cyclase SnoaL-like [Interproscan]. | 0.03 | OrthoFinder | |
| Sro651_g181500.1 | Contig2568.g20854 | Hypothetical protein | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005576 | extracellular region | IEP | Enrichment |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| MF | GO:0008061 | chitin binding | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| CC | GO:0009539 | photosystem II reaction center | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| CC | GO:0018995 | host cellular component | IEP | Enrichment |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| MF | GO:0020037 | heme binding | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| CC | GO:0033643 | host cell part | IEP | Enrichment |
| CC | GO:0033646 | host intracellular part | IEP | Enrichment |
| CC | GO:0033647 | host intracellular organelle | IEP | Enrichment |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| CC | GO:0042025 | host cell nucleus | IEP | Enrichment |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Enrichment |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR037401 | SnoaL-like | 58 | 176 |
| No external refs found! |