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  5. Sro1262_g257090.1

Sro1262_g257090.1 (Contig187.g2166)


Aliases : Contig187.g2166

Description : Hypothetical protein


Gene families : OG_01_0000754 (OrthoFinder) Phylogenetic Tree(s): OG0000754_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1262_g257090.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Sro116_g057100.1 Contig2228.g18486 Hypothetical protein 0.02 OrthoFinder
Sro1182_g249960.1 Contig4113.g31393 Hypothetical protein 0.03 OrthoFinder
Sro160_g072100.1 Contig2985.g23706 Hypothetical protein 0.08 OrthoFinder
Sro1697_g291900.1 Contig3875.g29819 Harbinger transposase-derived nuclease domain [Interproscan]. 0.08 OrthoFinder
Sro1942_g306740.1 Contig2861.g22939 Hypothetical protein 0.05 OrthoFinder
Sro3100_g343730.1 Contig1645.g14850 Hypothetical protein 0.04 OrthoFinder
Sro608_g174820.1 Contig3978.g30565 Harbinger transposase-derived nuclease domain [Interproscan]. 0.05 OrthoFinder
Sro76_g041500.1 Contig184.g2128 Harbinger transposase-derived nuclease domain [Interproscan]. 0.08 OrthoFinder
Sro804_g204910.1 Contig3806.g29164 Hypothetical protein 0.03 OrthoFinder
Sro996_g229350.1 Contig2630.g21349 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!