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  5. Sro1256_g256680.1

Sro1256_g256680.1 (Contig2043.g17573)


Aliases : Contig2043.g17573

Description : Ankyrin repeat protein


Gene families : OG_01_0000053 (OrthoFinder) Phylogenetic Tree(s): OG0000053_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1256_g256680.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Sro1256_g256620.1 Contig2043.g17567 Ankyrin repeat protein 0.04 OrthoFinder
Sro1365_g266550.1 Contig1439.g13236 Ankyrin repeat protein 0.01 OrthoFinder
Sro1457_g274370.1 Contig749.g8553 Ankyrin repeat protein 0.01 OrthoFinder
Sro279_g106680.1 Contig3140.g24907 Ankyrin repeat protein 0.01 OrthoFinder
Sro3429_g347940.1 Contig1653.g14876 Ankyrin repeat protein 0.02 OrthoFinder
Sro352_g124220.1 Contig2645.g21398 Ankyrin repeat protein 0.03 OrthoFinder
Sro3_g002830.1 Contig3832.g29468 Ankyrin repeat protein 0.02 OrthoFinder
Sro4255_g353540.1 Contig2877.g22997 Ankyrin repeat protein 0.04 OrthoFinder
Sro480_g151330.1 Contig2927.g23334 Ankyrin repeat protein 0.01 OrthoFinder
Sro488_g153020.1 Contig4435.g33269 Ankyrin repeat protein 0.03 OrthoFinder
Sro567_g167920.1 Contig3851.g29648 Ankyrin repeat protein 0.01 OrthoFinder
Sro815_g206420.1 Contig3639.g28090 Ankyrin containing protein (ISS) 0.02 OrthoFinder
Sro8_g006810.1 Contig89.g994 Ankyrin repeat protein 0.05 OrthoFinder
Sro8_g006880.1 Contig89.g1001 Ankyrin repeat protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment

No InterPro domains available for this sequence

No external refs found!