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  5. Sro1247_g255870.1

Sro1247_g255870.1 (Contig2843.g22827)


Aliases : Contig2843.g22827

Description : Lipopolysaccharide-responsive and beige-like anchor protein


Gene families : OG_01_0000641 (OrthoFinder) Phylogenetic Tree(s): OG0000641_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1247_g255870.1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Cz09g25140.t1 No alias BEACH domain; Pyrrolo-quinoline quinone repeat [Interproscan]. 0.02 OrthoFinder
EOD31744 No alias BEACH domain [Interproscan]. 0.02 OrthoFinder
PTI_04G02200.1 No alias BEACH domain; PH-BEACH domain [Interproscan]. 0.08 OrthoFinder
PTI_11G00330.1 No alias BEACH domain; PH-BEACH domain; WD40 repeat [Interproscan]. 0.07 OrthoFinder
PTI_25G00490.1 No alias BEACH domain; Domain of unknown function DUF4704;... 0.07 OrthoFinder
TP13G00130.1 No alias BEACH domain [Interproscan]. 0.02 OrthoFinder
TP14G02620.1 No alias BEACH domain [Interproscan]. 0.02 OrthoFinder
XM_002503222.1 MICPUN_82791, 82791 BEACH domain; WD40 repeat; PH-BEACH domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR000409 BEACH_dom 75 353
No external refs found!