Aliases : Contig4178.g31871
Description : Shock factor protein 4
Gene families : OG_01_0000044 (OrthoFinder) Phylogenetic Tree(s): OG0000044_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sro1238_g255240.1 | |
Cluster | HCCA: Cluster_304 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
PTI_15G02560.1 | No alias | Heat shock factor (HSF)-type, DNA-binding [Interproscan]. | 0.02 | OrthoFinder | |
Sro1068_g237480.1 | Contig852.g9367 | Stress transcription factor B-2b | 0.03 | OrthoFinder | |
Sro1900_g304250.1 | Contig3998.g30694 | Stress transcription factor B-2b | 0.03 | OrthoFinder | |
TP01G11580.1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
TP04G07230.1 | No alias | Heat shock factor (HSF)-type, DNA-binding [Interproscan]. | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
CC | GO:0042025 | host cell nucleus | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004112 | cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
MF | GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Enrichment |
CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Enrichment |
BP | GO:0007165 | signal transduction | IEP | Enrichment |
MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Enrichment |
BP | GO:0009117 | nucleotide metabolic process | IEP | Enrichment |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | Enrichment |
BP | GO:0009187 | cyclic nucleotide metabolic process | IEP | Enrichment |
BP | GO:0009190 | cyclic nucleotide biosynthetic process | IEP | Enrichment |
BP | GO:0016567 | protein ubiquitination | IEP | Enrichment |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Enrichment |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | Enrichment |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Enrichment |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | Enrichment |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000232 | HSF_DNA-bd | 212 | 303 |
No external refs found! |