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  5. Sro122_g059170.1

Sro122_g059170.1 (Contig71.g736)


Aliases : Contig71.g736

Description : Chloroplastic


Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro122_g059170.1
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
Cre08.g365900 30773702, LHCSR1 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cz16g02040.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
EOD03771 No alias Light-harvesting family [Ensembl]. 0.02 OrthoFinder
EOD03774 No alias Light-harvesting family [Ensembl]. 0.01 OrthoFinder
EOD05780 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD06468 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD09836 No alias Light harvesting protein [Ensembl]. 0.01 OrthoFinder
EOD15375 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD20807 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
EOD20809 No alias Light harvesting protein [Ensembl]. 0.01 OrthoFinder
PTI_01G10030.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
PTI_02G03310.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_05G00320.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
PTI_07G04400.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
PTI_14G03460.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Sro1207_g252450.1 Contig242.g2948 B binding protein L1818, chloroplastic 0.02 OrthoFinder
TP01G11130.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
TP05G03540.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
TP05G05630.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
TP08G04750.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
TP09G03710.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
TP18G01450.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
TP23G01260.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
TP23G01280.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 41 201
No external refs found!